Registration
09:30-10:00 Immunopeptidomics sample preparation
10:00-10:30 Basic MS Acquisition for Immunopeptidomics
10:30-11:00 Coffee Break
11:00-11:30 Immunopeptidomics Database Assembly
11:30-12:00 Neoantigen Spectral Interpretation
12:00-13:00 Lunch
13:00-13:20 Opening Remarks
13:20-14:20 Poster Session #1
14:20-15:00 Lecture by Stefan Tenzer, Pushing the sensitivity limits of immunopeptidomics
15:00-15:20 Coffee Break
15:20-16:00 Lecture by Fabio Marino, Complementary mass spectrometry-based approaches for mapping the immunopeptidome and its associated post-translational modifications
16:00-16:40 Jen Dionne, ‘DeSIPHRing’ the immunopeptidome: De-novo Sequencing and Identification of peptides with High-Throughput Raman Spectroscopy
16:40-17:00 Panel Discussion
Optional Singapore Botanical Garden Walk
Dinner on your own
09:00-9:30 Introduction to MS Systems
9:30-10:00 Method Design for DDA
10:00-10:30 Method Design for PRM
10:30-10:50 Coffee Break
10:50-11:30 Method Design for DIA
11:30-12:00 Q&A
12:00-13:00 Lunch
13:00-14:00
14:00-14:40 Company talks, Titles TBC
14:40-15:00 Coffee Break
15:00-15:40 Lecture by Alexey Nesvizhskii, Immunopeptidomics Data Analysis Workflows in FragPipee
15:40-16:20 Lecture by Lennart Martens, Focus, but broadly: AI's role in the high dynamic range immunopeptidome
16:20-16:40 Flash Talks
16:40-17:00 Panel Discussion
From 17:00-17:30 Gathering for the Gala dinner. More information coming soon.
9:00-9:40 Mathias Wilhelm, Title TBC
9:40-10:20 Morten Nielsen, Integrating MS-immunopeptidomics and immunoinformatics for rational antigen discovery in complex pathogens
10:20-10:40 Coffee Break
10:40-11:20 Pat Illing, When the target is self - finding what makes self look dangerous
11:20-11:40 Flask Talks
11:40-12:00 Panel Discussion
12:00-13:00 Lunch
13:00-14:00
14:00-14:40 Francis Impens, Immunopeptidomics for next-generation bacterial vaccine development
14:40-15:00 Coffee Break
15:00-15:40 Cheryl Lichti, From Discovery to Validation: A Novel Neoantigen in Type 1 Diabetes
15:40-16:20 Nikolaos G. Sgourakis, From Cold to Hot Tumors: Leveraging Antigen Processing Machinery for Immunopeptidomic Target Discovery
16:20-16:40 Flash Talks
16:40-17:00 Panel Discussion
Dinner on your own
09:00-9:30 Lecture by ncPP Speaker, Title TBD
09:30-10:00 Lecture by Yardena Samuels, Challenges and solutions in effectively targeting neoantigens
10:00-10:30 Coffee Break
10:30-11:00 Lecture by ncPP Speaker, Title TBD
11:00-11:30 Lecture by Michal Bassani-Sternberg, Multi-omic discovery of non-canonical immunopeptidome sources: challenges and emerging opportunities
11:30-12:00 Panel Discussion and Closing
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